Erno Lindfors

04.11.2011
Department of Biomedical Engineering and Computational Science, Aalto University School of Science and Technology

Network Biology. Applications in medicine and biotechnology

Reviewers:

Docent Juho Rousu, Department of Computer Science, University of Helsinki

Docent Tero Aittokallio, Department of Mathematics, University of Turku

Opponent:

Professor Olli Yli-Harja, Department of Signal Processing, Tampere University of Technology

Custos:

Professor Kimmo Kaski, Department of Biomedical Engineering and Computational Science, Aalto University School of Science and Technology

Publications:

  1. Lindfors E, Gopalacharyulu PV, Halperin E, Oresic M. (2009). Detection of molecular paths associated with insulitis and type 1 diabetes in non-obese diabetic mouse. PLoS ONE, 4:e7323, 9 p.
  2. Gopalacharyulu PV, Lindfors E, Bounsaythip C, Kivioja T, Yetukuri L, Hollmén J, Oresic M. (2005). Data integration and visualization system for enabling conceptual biology. Bioinformatics, 21:i177-i185.
  3. Gopalacharyulu PV (*), Lindfors E (*), Miettinen J, Bounsaythip C, Oresic M. (2008). An integrative approach for biological data mining and visualization. International Journal of Data Mining and Bioinformatics, 2:54-77.
  4. Bounsaythip C, Lindfors E, Gopalacharyulu PV, Hollmén J, Oresic M. (2005). Network-based representation of biological data for enabling context-based mining. In: Catherine Bounsaythip, Jaakko Hollmén, Samuel Kaski, and Matej Oresic, editors, Proceedings of KRBIO'05, International Symposium on Knowledge Representation in Bioinformatics, Espoo, Finland, Jun 2005. Helsinki University of Technology, Laboratory of Computer and Information Science, 6 p.
  5. Lindfors E, Mattila J, Gopalacharyulu PV, Pesonen A, Lötjönen J, Oresic M. Heterogeneous Biological Network Visualization System: Case Study in Context of Medical Image Data. Advances in Experimental Medicine and Biology, In press.
  6. Gopalacharyulu PV (*), Velagapudi VR(*), Lindfors E, Halperin E, Oresic M. (2009). Dynamic network topology changes in functional modules predict responses to oxidative stress in yeast. Molecular BioSystems, 5(3):276-287.
(*) Equal contribution